Publications


Listing of my papers: [adsabs] [astro-ph] [PDF]

2013

Low-Mach Number Modeling of Core Convection in Massive Stars ♦
Gilet, C., Almgren, A. S., Bell, J. B., Nonaka, A. Woosley, S. E., & Zingale, M. 2013, submitted to ApJ
Low Mach Number Models of Convection in Helium Shells on Sub-Chandrasekhar White Dwarfs. I. Methodology ♦ [astro-ph] [IOP]
Zingale, M., Nonaka, A., Almgren, A. S., Bell, J. B., Malone, C. M., & Orvedahl, R. J. 2013, ApJ, 764, 97

2012

High-Resolution Simulations of Convection Preceding Ignition in Type Ia Supernovae Using Adaptive Mesh Refinement ♦ [ads]
Nonaka, A., Aspden, A. J., Zingale, M., Almgren, A. S., Bell, J. B., & Woosley, S. E. 2012, ApJ, 745, 73

2011

From Convection to Explosion: End-to-End Simulation of Type Ia Supernovae [ads]
Nonaka, A., Almgren, A. S., Bell, J. B., Ma, H., Woosley, S. E., & Zingale, M. 2011, Proceedings of SciDAC 2011, Denver, Co, July 10-14, 2011, http://press.mcs.anl.gov/scidac2011/
The Convective Phase Preceding Type Ia Supernovae ♦ [IOP]
Zingale, M., Nonaka, A., Almgren, A. S., Bell, J. B., Malone, C. M., & Woosley, S. E. 2011, ApJ, 740, 8
Multidimensional Modeling of Type I X-ray Bursts. I. Two-Dimensional Convection Prior to the Outburst of a Pure He Accretor ♦ [IOP]
Malone, C. M., Nonaka, A. J., Almgren, A. S., Bell, J. B., & Zingale, M., 2011, ApJ, 728, 118

2010

MAESTRO, CASTRO, and SEDONA --- Petascale Codes for Astrophysical Applications [astro-ph] [SciDAC 2010]
Almgren, A., Bell, J., Kasen, D., Lijewski, M., Nonaka, A., Nugent, P., Rendlement, C., Thomas, R., & Zingale, M., 2010, Proceedings of the 2010 Scientific Discovery through Advanced Computing (SciDAC) Conference. Chattanooga, Tennessee, July 11-15, 2010. Oak Ridge National Laboratory. http://computing.ornl.gov/workshops/scidac2010/
Type Ia Supernovae: Advances in Large Scale Simulation [SciDAC 2010]
Ma, H., Zingale, M., Woosley, S. E., Aspden, A. J., Bell, J. B., Almgren, A. S., Nonaka, A., & Dong, S., 2010, Proceedings of the 2010 Scientific Discovery through Advanced Computing (SciDAC) Conference. Chattanooga, Tennessee, July 11-15, 2010. Oak Ridge National Laboratory. http://computing.ornl.gov/workshops/scidac2010/
MAESTRO: An Adaptive Low Mach Number Hydrodynamics Algorithm for Stellar Flows ♦ [IOP]
Nonaka, A., Almgren, A. S., Bell, J. B., Lijewski, M. J. Malone, C., & Zingale, M., 2010, ApJS, 188, 358
CASTRO: A New Compressible Astrophysical Solver. I. Hydrodynamics and Self-Gravity ♦ [IOP]
Almgren, A. S., Beckner, V. E., Bell, J. B., Day, M. S., Howell, L. H., Joggerst, C. C., Lijewski, M. J., Nonaka, A., Singer, M., & Zingale, M., 2010, ApJ, 715, 1221

2009

Low Mach Number Modeling of Type Ia Supernovae. IV. White Dwarf Convection ♦ [ApJ Online]
Zingale, M., Almgren, A. S., Bell, J. B., Nonaka, A., & Woosley, S. E. 2009, ApJ, 704, 196.
Type Ia Supernovae: Advances in Large Scale Simulation [IOP]
Woosley, S. E., Almgren, A. S., Aspden, A. J., Bell, J. B., Kasen, D., Kerstein, A. R., Ma, H., Nonaka, A., & Zingale, M., 2009, Proceedings of SciDAC 2009, Journal of Physics: Conference Series, 180, 012023
A New Low Mach Number Approach in Astrophysics ♦ [CiSE]
Almgren, A. S., Bell, J. B., Nonaka, A., & Zingale, M. 2009, Computing in Science and Engineering, vol. 11, no. 2, 24

2008

Astrophysical Applications of the Maestro Code [IOP]
Zingale, M., Almgren, A. S., Bell, J. B., Malone, C. M., & Nonaka, A. 2008, Proceedings of SciDAC 2008, Journal of Physics: Conference Series, 125, 012013
Turbulence-Flame Interactions in Type Ia Supernovae ♦ [ApJ Online]
Aspden, A. J., Bell, J. B., Day, M. S., Woosley, S. E., & Zingale, M. 2008, ApJ, 689, 1173
Low Mach Number Modeling of Type Ia Supernovae. III. Reactions ♦ [ApJ Online]
Almgren, A. S., Bell, J. B., Nonaka, A., & Zingale, M. 2008, ApJ, 684, 449

2007

Type Ia Supernovae [IOP]
Woosley, S. E., Almgren, A., Bell, J. B., Glatzmaier, G., Kasen, D., Kerstein, A. R., Ma, H., Nugent, P., Roepke, F., Sankaran, V., & Zingale, M. 2007, Proceedings of SciDAC 2007, Journal of Physics: Conference Series, 78, 012081
MAESTRO: A Low Mach Number Stellar Hydrodynamics Code [IOP]
Almgren, A. S., Bell, J. B., & Zingale, M. 2007, Proceedings of SciDAC 2007, Journal of Physics: Conference Series, 78, 012085
Propagation of the First Flames in Type Ia Supernovae ♦ [ApJ Online]
Zingale, M. & Dursi, L. J. 2007, ApJ, 656, 333

2006

New Approaches for Modeling Type Ia Supernovae [IOP]
Zingale, M., Almgren, A. S., Bell, J. B., Day, M. S., Rendleman, C. A., & Woosley, S. E. 2006, Proceedings of SciDAC 2006, Journal of Physics: Conference Series, 46, 385
Low Mach Number Modeling of Type Ia Supernovae. II. Energy Evolution ♦ [ApJ Online]
Almgren, A. S., Bell, J. B., Rendleman, C. A., & Zingale, M. 2006, ApJ, 649, 927
Low Mach Number Modeling of Type Ia Supernovae. I. Hydrodynamics ♦ [ApJ Online]
Almgren, A. S., Bell, J. B., Rendleman, C. A., & Zingale, M. 2006, ApJ, 637, 922

2005

The Physics of Flames in Type Ia Supernovae [IOP]
Zingale, M., Woosley, S. E., Bell, J. B., Day, M. S., & Rendleman, C. A. 2005, Proceedings of SciDAC 2005, Journal of Physics: Conference Series, 16, 405
Three-Dimensional Numerical Simulations of Rayleigh-Taylor Unstable Flames in Type Ia Supernovae ♦ [ApJ online] [multimedia]
Zingale, M., Woosley, S. E., Rendleman, C. A., Day, M. S., & Bell, J. B. 2005, ApJ, 632, 1021

2004

Direct Numerical Simulations of Type Ia Supernovae Flames II: The Rayleigh-Taylor Instability ♦ [ApJ Online] [multimedia]
Bell, J. B., Day, M. S., Rendleman, C. A., Woosley, S. E. & Zingale, M. A. 2004, ApJ, 608, 883
Direct Numerical Simulations of Type Ia Supernovae Flames I: The Landau-Darrieus Instability ♦ [ApJ Online] [multimedia]
Bell, J. B., Day, M. S., Rendleman, C. A., Woosley, S. E. & Zingale, M. A. 2004, ApJ, 606, 1029
Issues with Validating an Astrophysical Simulation Code ♦ [IEEE Online]
Calder, A. C., Dursi, L. J., Fryxell, B., Plewa, T., Weirs, V. G., Dupont, T., Robey, H. F., Drake, R. P., Remington, B. A., Dimonte, G., Hayes, J., Stone, J. M., Ricker, P. M., Timmes, F. X., Zingale, M., & Olson, K. 2004, Computing in Science and Engineering, vol. 6, no. 5, 10
On the Nonlinear Evolution of Wind-driven Gravity Waves ♦ [PoF Online]
Alexakis, A., Calder, A. C., Dursi, L. J., Rosner, R., Truran, J. W., Fryxell, B., Zingale, M., Timmes, F. X., Olson, K., Ricker, P. 2004, Phys. of Fluids, 16, 9, 3256
A Comparative Study of the Turbulent Rayleigh-Taylor Instability Using High-Resolution Three-Dimensional Numerical Simulations: The Alpha-Group Collaboration ♦ [PoF Online]
Dimonte, G., Youngs, D. L., Dimits, A., Weber, S., Marinak, M., Wunsch, S., Garasi, C., Robinson, A., Andrews, M. J., Ramaprabhu, P., Calder, A. C., Fryxell, B., Biello, J., Dursi, L., MacNeice, P., Olson, K., Ricker, P., Rosner, R., Timmes, F., Tufo, H., Young, Y.-N., Zingale, M. 2004, Phys. of Fluids, 16, 5, 1668
Adaptive Low Mach Number Simulations of Nuclear Flame Microphysics ♦ [Science Direct]
Bell, J. B., Day, M. S., Rendleman, C. A., Woosley, S. E. & Zingale, M. A. 2004, J. Comput. Phys., 195, 2, 677
On Heavy Element Enrichment in Classical Novae ♦ [ApJ Online]
Alexakis, A., Calder, A. C., Heger, A., Brown, E. F., Dursi, L. J., Truran, J. W., Rosner, R., Lamb, D. Q., Timmes, F. X., Fryxell, B., Zingale, M., Ricker, P. M., & Olson, K. 2004, ApJ, 602, 931
Morphology of Rising Hydrodynamic and Magneto-hydrodynamic Bubbles from Numerical Simulations ♦ [ApJ Online]
Robinson, K., Dursi, L. J., Ricker, P. M., Rosner, R., Calder, A. C., Zingale, M., Linde, T., Caceres, A., Fryxell, B., Olson, K., Riley, K., Siegel, A., Truran, J. W., & Vladimirova, N. 2004, ApJ, 601, 621

2003

Efficiency Gains from Time Refinement on Spatially Refined Block-Structured Meshes [astro-ph preprint]
Dursi, L. J. & Zingale, M. Adaptive Mesh Refinement--Theory and Applications Proceedings of the Chicago Workshop on Adaptive Mesh Refinement Methods, Sept. 3-5, 2003 Series: Lecture Notes in Computational Science and Engineering, Vol. 41 Plewa, Tomasz; Linde, Timur; Weirs, V. Gregory (Eds.) 2005, XIV, 554
Parallel netCDF: A High-Performance Scientific I/O Interface ♦ [PDF]
Li, J., Laio, W.-k., Choudhary, A., Ross, R., Thakur, R., Gropp, W., Latham, R., Siegel, A., Gallagher, B., Zingale, M. 2003, Proceedings of SC2003
The Response of Astrophysical Thermonuclear Flames to Curvature ♦ [ApJ Online]
Dursi, L. J., Zingale, M., Calder, A. C., Fryxell, B., Timmes, F. X., Vladimirova, N., Rosner, R., Caceres, A., Lamb, D. Q., Olson, K., Ricker, P. M., Riley, K., Siegel, A., & Truran, J. W. 2003, ApJ, 595, 955

2002

Mapping Initial Hydrostatic Models in Godunov Codes ♦ [ApJ Online]
Zingale, M., Dursi, L. J., ZuHone, J., Calder, A. C., Fryxell, B., Plewa, T., Truran, J. W., Caceres, A., Olson, K., Ricker, P. M., Riley, K., Rosner, R., Siegel, A., Timmes, F. X., & Vladimirova, N. 2002, ApJS, 143, 539
On Validating an Astrophysical Simulation Code ♦ [ApJ Online]
Calder, A. C., Fryxell, B., Plewa, T., Rosner, R., Dursi, L. J., Weirs, V. G., Dupont, T., Robey, H. F., Kane, J. O., Remington, B. A., Drake, R. P., Dimonte, G., Zingale, M., Timmes, F. X., Olson, K., Ricker, P. M., MacNeice, P., & Tufo, H. M. 2002, ApJS, 142, 201
Investigations of Pointwise Ignition of Helium Deflagrations on Neutron Stars [astro-ph preprint] [multimedia]
Zingale, M., Woosley, S. E., Cumming, A., Calder, A., Dursi, L. J., Fryxell, B., Olson, K., Ricker, P., Rosner, R., & Timmes, F. X. 3D Stellar Evolution, ASP Conference Proceedings, Vol. 293, 22-26 July 2002 at UC Davis, Livermore, CA, Ed. by S. Turcotte, S. C. Keller, and R. M. Cavallo
Onset of Convection on a Pre-Runaway White Dwarf [astro-ph preprint]
Dursi, L. J., Calder, A. C., Alexakis, A., Truran, J. W., Zingale, M., Fryxell, B., Ricker, P., Timmes, F. X., & Olson, K. 2002, Classical Nova Explosions: International Conference on Classical Nova Explosions. AIP Conference Proceedings, Vol. 637. Sitges, Spain, 20-24 May, 2002. Edited by M. Hernanz and J. Jose
Mixing by Non-linear Gravity Wave Breaking on a White Dwarf Surface [astro-ph preprint]
Calder, A. C., Alexakis, A., Dursi, L. J., Rosner, R., Truran, J. W., Fryxell, B., Ricker, P., Zingale, M., Olson, K., Timmes, F. X., & MacNeice, P. 2002, Classical Nova Explosions: International Conference on Classical Nova Explosions. AIP Conference Proceedings, Vol. 637. Sitges, Spain, 20-24 May, 2002. Edited by M. Hernanz and J. Jose
Mixing by Wave Breaking at the Surface of a White Dwarf [ADS]
Truran, J. W.; Alexakis, A.; Calder, A. C.; Dursi, L. J.; Zingale, M.; Fryxell, B.; Ricker, P.; Timmes, F. X.; Olson, K.; Rosner, R. 2002, Proceedings of the 11th Workshop on "Nuclear Astrophysics", Ringberg Castle, Tegernsee, Germany, February 11-16, 2002 / Wolfgang Hillebrandt and Ewald Müller (Eds.). MPA/P13, Garching b. München, Germany: Max-Planck-Institut für Astrophysik, 186

2001

A Case Study in Application I/O on Linux Clusters ♦ [PDF]
Ross, R., Nurmi, D., Cheng, A., & Zingale, M. 2001, sc2001.org
Helium Detonations on Neutron Stars ♦ [ApJ Online] [multimedia]
Zingale, M., Timmes, F. X., Fryxell, B., Lamb, D. Q., Olson, K., Calder, A. C., Dursi, L. J., Ricker, P., Rosner, R., MacNeice, P., & Tufo, H. 2001, ApJS, 133, 195
Numerical Simulations of Thermonuclear Flashes on Neutron Stars [paper from adsabs]
Fryxell, B., Zingale, M., Timmes, F. X., Lamb, D. Q., Olson, K., Calder, A. C., Dursi, L. J., Ricker, P., Rosner, R., Truran, J. W., MacNeice, P., & Tufo, H. 2001, Nuclear Physics A, 688, 172
Quenching Processes in Flame-Vortex Interactions [postscript] [multimedia]
Zingale, M., Niemeyer, J. C., Timmes, F. X., Dursi, L. J., Calder, A. C., Fryxell, B., Lamb, D. Q., Olson, K., Ricker, P., Rosner, R., Truran, J. W., & MacNeice, P. 2001, 20th Texas Symposium on Relativistic Astrophysics, Austin, Texas, 10-15 Dec. 2000, Melville, NY: AIP Conference Proceedings, Vol. 586. Edited by J. C. Wheeler and H. Martel
Simulations of Astrophysical Fluid Instabilities [astro-ph preprint]
Calder, A. C., Fryxell, B., Rosner, R., Dursi, L. J., Olson, K., Ricker, P. M., Timmes, F. X., Zingale, M., MacNeice, P., & Tufo, H. M. 2001, 20th Texas Symposium on Relativistic Astrophysics, Austin, Texas, 10-15 Dec. 2000, Melville, NY: AIP Conference Proceedings, Vol. 586. Edited by J. C. Wheeler and H. Martel

2000

High-Performance Reactive Fluid Flow Simulations Using Adaptive Mesh Refinement on Thousands of Processors ♦ [PDF]
Calder, A. C., Curtis, B. C., Dursi, L. J., Fryxell, B., Henry, G., MacNeice, P., Olson, K., Ricker, P., Rosner, R., Timmes, F. X., Tufo, H. M., Truran, J. W., & Zingale, M. 2000, Gordon Bell Prize winner, Special Category, sc2000.org
On the Cellular Structure of Carbon Detonations ♦ [ApJ Online]
Timmes, F. X., Zingale, M., Olson, K., Fryxell, B., Ricker, P., Calder, A. C., Dursi, L. J., Truran, J. W., & Rosner, R. 2000, ApJ, 543, 938
FLASH: An Adaptive Mesh Hydrodynamics Code for Modelling Astrophysical Thermonuclear Flashes ♦ [ApJ Online]
Fryxell, B., Olson, K., Ricker, P., Timmes, F. X., Zingale, M., Lamb, D. Q., MacNeice, P., Rosner, R., & Tufo, H. 2000, ApJS, 131, 273
Flash Code: Studying Astrophysical Thermonuclear Flashes ♦ [AIP Online]
Rosner, R., Calder, A., Dursi, J., Fryxell, B., Lamb, D. Q., Niemeyer, J. C., Olson, K., Ricker, P., Timmes, F. X., Truran, J. W., Tufo, H., Young, Y., Zingale, M., Lusk, E., & Stevens, R., 2000, Computing in Science and Engineering, vol. 2, no. 2, 33
Adaptive Mesh Simulations Of Astrophysical Detonations Using the ASCI Flash Code
Fryxell, B., Calder, A. C., Dursi, L. J., Lamb, D. Q., MacNeice, P., Olson, K., Ricker, P. M., Rosner, R., Timmes, F. X., Truran, J. W., Tufo, H. M., & Zingale, M. 2000, Proceedings of the VII International Workshop on Advanced Computing and Analysis Techniques in Physics Research (ACAT 2000), Fermilab, October 16-20, 2000
Large-Scale Simulations of Clusters of Galaxies [astro-ph preprint]
Ricker, P. M., Calder, A. C., Dursi, L. J., Fryxell, B., Lamb, D. Q., MacNeice, P., Olson, K., Rosner, R., Timmes, F. X., Truran, J. W., Tufo, H. M., & Zingale, M. 2000, Proceedings of the VII International Workshop on Advanced Computing and Analysis Techniques in Physics Research (ACAT 2000), Fermilab, October 16-20, 2000
Helium Detonations on Neutron Stars
Fryxell, B., Zingale, M., Timmes, F. X., Lamb, D. Q., Olson, K., Calder, A. C., Dursi, L. J., Ricker, P., Rosner, R., Truran, J. W., MacNeice, P., & Tufo, H. 2000, Proceedings of the 10th Workshop on ``Nuclear Astrophysics'', Ringberg Castle, Tegernsee, Germany, March 20-25 2000

♦ = refereed

Selected Talks and Presentations

2013

May 3 Astronomy Open Night, Stony Brook University

When Asteroids Attack

2012

Oct 10 Astro Computing Working Group @ Nuclear Astro Town Meeting 2012, Detroit, MI

Thermonuclear Driven Events

[PDF]
April 27 Astronomy Open Night, SUNY Stony Brook

Motions in the Skies
April 5 Nuclear Astrophysics Seminar at Ohio University

The Challenges of Modeling Explosive Phenomena

2011

Oct. 28 Friday Afternoon Talk to Stony Brook graduate students

The Challenges of Modeling Explosive Phenomena
July 15 INT Program INT-11-2b Astrophysical Transients: Multi-messenger Probes of Nuclear Physics

The Challenges of Modeling Explosive Phenomena
May 6 Astronomy Open Night, SUNY Stony Brook

Stellar Violence
April 12 Stony Brook Physics and Astronomy Colloquium

Meeting the Computational Demands of Astrophysical Convection

[recorded version]

2010

July 28 X-ray bursts and burst oscillations workshop at the Lorentz Center, Leiden, Netherlands

The Algorithmic Challenges of Multidimensional Models of X-ray Bursts
July 22 Nuclei in the Cosmos XI, Heidelberg, Germany

Multi-dimensional models of convection preceding type Ia supernovae
May 13 UVa/NRAO Colloquium

Modeling Convection and Ignition in Type Ia Supernovae
May 7 Astronomy Open Night, SUNY Stony Brook

Measuring Distances in the Universe
Mar. 31 Nuclear Physics Seminar, MSU

Modeling Convection and Ignition in Type Ia Supernovae
Jan. 6 AAS 215th Meeting, Washington DC

White Dwarf Convection Preceding Type Ia Supernovae

(poster)

2009

Dec. 6 Public Talk, Amateur Observers' Society of New York

Type Ia Supernovae: Theory and Computation
May 12 Astronomy Seminar, American Museum of Natural History

Modeling Convection and Ignition in Type Ia Supernovae
May 1 Astronomy Open Night, SUNY Stony Brook

We Are All Made of Stars: A Survey of Stellar Nucleosynthesis

2008

Sept. 30 IAS Astrophysics Seminar

New Methods for Modeling Type Ia Supernovae
July 15 SciDAC 2008, Seattle, WA

Astrophysical Applications of the Maestro Code

(poster)
May 2 Astronomy Open Night, SUNY Stony Brook

Computing the Stars: How Computers Are Used in Astrophysics

2007

May 22 KITP Program: Accretion and Explosion: the Astrophysics of Degenerate Stars

New Algorithms for Simulating Low Mach Astrophysical Flows

[recorded version]
May 4 Astronomy Open Night, SUNY Stony Brook

Do You Really Know Your Own Sun?
April 6 Astronomy Seminar, Rutgers University

The Challenges of Modeling Type Ia Supernovae

2006

Oct 31 Astronomy Colloquia, McGill University

Understanding Type Ia Supernovae
Sep 26 Issues in Science and Engineering, Living Learning Center, SUNY Stony Brook

Understainding Type Ia Supernovae
Jul 26 DOE PECASE Ceremony

Understanding Type Ia Supernovae

(poster)
Jun 27 SciDAC 2006, Denver, CO

The Challenges of Modeling Type Ia Supernovae
May 5 Astronomy Open Night, SUNY Stony Brook

Understanding Type Ia Supernovae
Apr 21 Friday Afternoon Seminar, SUNY Stony Brook

Modeling Type Ia Supernovae

2005

Oct 3 T-13 Seminar, LANL

Simulations of Thermonuclear Flames in Type Ia Supernovae
June 26 SciDAC 2005, San Francisco, CA

The Physics of Thermonuclear Flames in Type Ia Supernovae

(poster)
May 29 AAS 206th Meeting, Minnesota, MN

Turbulent Flames in SNe Ia
May 19-20 JINA Workshop on Classical Novae and Type Ia Supernovae, Santa Barbara, CA

Flame Instabilities in Type Ia Supernovae
March 1 Astronomy Seminar, SUNY Stony Brook

Flame Instabilities in Type Ia Supernovae
Feb 23 N Division Seminar, LLNL

Flame Instabilities in Type Ia Supernovae

Press Coverage

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